Revolutionizing Network Pharmacology: A Multi-Omic Approach to Disease Treatment Discovery

Tuesday 08 April 2025


A new online platform has been launched, designed to help scientists and researchers explore the complex relationships between genes, proteins, and diseases. The platform, called POINT, is a web-based tool that integrates multi-omics biological networks, advanced algorithms, and authoritative knowledge graphs to facilitate network pharmacology research.


Network pharmacology is an emerging field that seeks to understand how drugs interact with biological systems at multiple levels, including genetic, protein, and disease networks. By combining these different perspectives, researchers can gain a deeper understanding of the mechanisms underlying drug action and develop new therapeutic strategies.


POINT’s multi-omics biological networks are constructed from a range of sources, including genomic data, transcriptomic data, proteomic data, and knowledge graphs derived from authoritative databases such as Gene Ontology and UniProt. The platform also incorporates advanced algorithms for network integration, visualization, and analysis, allowing researchers to explore the relationships between different genes, proteins, and diseases.


One of the key features of POINT is its ability to predict potential drug targets using a technique called random walk with restart (RWR). This algorithm simulates the flow of information through biological networks, identifying nodes that are most likely to be involved in disease pathways. POINT also provides tools for functional enrichment analysis, which allows researchers to identify the biological processes and pathways that are affected by specific genes or proteins.


In addition to its analytical capabilities, POINT also includes a knowledge graph-based module for drug repurposing and screening. This module uses a technique called diffusion profile similarity to predict novel drug-disease relationships, allowing researchers to identify potential new therapeutic applications for existing drugs.


The platform is designed to be user-friendly, with an intuitive interface that allows researchers to easily navigate the different modules and tools. POINT also includes a range of visualization options, including 2D and 3D network visualizations, to help researchers understand complex biological relationships.


The development of POINT represents a significant milestone in the field of network pharmacology, offering researchers a powerful new tool for exploring the complex relationships between genes, proteins, and diseases. By integrating multiple levels of biological data and advanced algorithms, POINT has the potential to accelerate the discovery of new therapeutic strategies and improve our understanding of human disease.


POINT is available online, free of charge, and is open to researchers from academia, industry, and government. The platform’s developers are committed to ongoing maintenance and updates, ensuring that it remains a valuable resource for the scientific community.


Cite this article: “Revolutionizing Network Pharmacology: A Multi-Omic Approach to Disease Treatment Discovery”, The Science Archive, 2025.


Network Pharmacology, Genes, Proteins, Diseases, Multi-Omics, Biological Networks, Drug Targets, Random Walk With Restart, Functional Enrichment Analysis, Diffusion Profile Similarity


Reference: Zihao He, Liu Liu, Dongchen Han, Kai Gao, Lei Dong, Dechao Bu, Peipei Huo, Zhihao Wang, Wenxin Deng, Jingjia Liu, et al., “POINT: a web-based platform for pharmacological investigation enhanced by multi-omics networks and knowledge graphs” (2025).


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